SMTL ID : 6oip.1

Crystal structure of MYST acetyltransferase domain in complex with inhibitor 34

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.35, C.38, H.51, C.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.35, A:C.38, A:H.51, A:C.55

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: K.68, S.69, I.71, I.261 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.68 GOL.3: 6 residues within 4Å: Chain A: R.150, L.181, L.184, S.185, S.188 Ligands: MLS.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.150, A:S.188, A:S.188

1 x MLS: 2-fluoro-3-methyl-N'-[(naphthalen-2-yl)sulfonyl]benzohydrazide(Non-covalent)

MLS.4: 20 residues within 4Å: Chain A: I.142, I.144, Q.149, R.150, R.151, G.152, Y.153, G.154, R.155, I.158, L.181, G.182, S.185, Y.186, S.188, Y.189, W.192, Q.255, Y.256 Ligands: GOL.3 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:I.142, A:I.144, A:R.155, A:R.155, A:R.155, A:I.158, A:L.181 Hydrogen bonds: A:R.150, A:G.152, A:G.154, A:R.155, A:S.185, A:S.185, A:S.185 Water bridges: A:R.151, A:R.151 pi-Cation interactions: A:R.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Leaver, D.J. et al., Discovery of Benzoylsulfonohydrazides as Potent Inhibitors of the Histone Acetyltransferase KAT6A. J.Med.Chem. (2019)

Release Date

2019-07-03

Peptides

Histone acetyltransferase KAT8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone acetyltransferase KAT8

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