SMTL ID : 6p0f.1

N-terminal domain of Thermococcus Gammatolerans McrB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

monomer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 5 residues within 4Å: Chain A: Y.147, N.148, Y.151, R.162 Ligands: SO4.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.146, A:N.148 Water bridges: A:N.148

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Y.147, K.159, R.162 Ligands: MES.1 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.162, A:R.162 Salt bridges: A:K.159, A:R.162

1 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.3: 1 residues within 4Å: Chain A: K.26 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hosford, C.J. et al., The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs. J.Biol.Chem. (2020)

Release Date

2019-12-18

Peptides

GTPase subunit of restriction endonuclease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTPase subunit of restriction endonuclease

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