SMTL ID : 6p69.2 (1 other biounit)

Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 11.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.114, R.171, T.201, N.203, R.205 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.201, A:N.203 Water bridges: A:R.205 Salt bridges: A:R.114, A:R.171, A:R.205 SO4.2: 4 residues within 4Å: Chain A: Q.118, N.203, R.205, S.243 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.118, A:N.203, A:S.243 Salt bridges: A:R.205

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: W.228, Y.245, L.257, H.261, R.262, M.263, W.281 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.245, A:M.263 Water bridges: A:W.228

1 x O21: N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl][3-(4-methylpiperazin-1-yl)propyl]amino}pyrimidin-4-yl)amino]phenyl}prop-2-enamide(Covalent)

O21.4: 19 residues within 4Å: Chain A: L.28, V.36, L.38, A.56, K.58, E.75, M.79, I.89, V.103, V.105, E.106, C.107, A.108, S.109, G.111, L.174, A.184, D.185, F.186 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.28, A:L.28, A:L.38, A:L.174 Hydrogen bonds: A:A.108, A:A.108, A:D.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prajapati, S., To be published. TBD

Release Date

2019-06-19

Peptides

Fibroblast growth factor receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Fibroblast growth factor receptor 1

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