- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.87 Å
- Oligo State
- homo-trimer
- Ligands
- 33 x SO4: SULFATE ION(Non-functional Binders)
- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.10: 6 residues within 4Å:- Chain A: H.43, Q.45, T.330, W.366, V.393, T.394
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:H.43
GOL.11: 3 residues within 4Å:- Chain A: D.103, F.110, Y.113
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:F.110, A:F.110
- Water bridges: A:D.103, A:Y.113
GOL.17: 7 residues within 4Å:- Chain A: A.381, D.382, K.383, E.384, E.495, R.498, N.499
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.382, A:E.384, A:E.495
GOL.28: 6 residues within 4Å:- Chain B: H.43, Q.45, T.330, W.366, V.393, T.394
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:H.43
GOL.29: 3 residues within 4Å:- Chain B: D.103, F.110, Y.113
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:F.110, B:F.110
- Water bridges: B:D.103, B:Y.113
GOL.35: 7 residues within 4Å:- Chain B: A.381, D.382, K.383, E.384, E.495, R.498, N.499
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.382, B:E.384, B:E.495
GOL.46: 6 residues within 4Å:- Chain C: H.43, Q.45, T.330, W.366, V.393, T.394
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:H.43
GOL.47: 3 residues within 4Å:- Chain C: D.103, F.110, Y.113
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:F.110, C:F.110
- Water bridges: C:D.103, C:Y.113
GOL.53: 7 residues within 4Å:- Chain C: A.381, D.382, K.383, E.384, E.495, R.498, N.499
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:D.382, C:E.384, C:E.495
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.12: 1 residues within 4Å:- Chain A: N.38
No protein-ligand interaction detected (PLIP)NAG.13: 6 residues within 4Å:- Chain A: N.180, N.251, D.252, A.253
- Chain C: S.232
- Ligands: SO4.9
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.180
NAG.14: 1 residues within 4Å:- Chain A: N.169
No protein-ligand interaction detected (PLIP)NAG.18: 5 residues within 4Å:- Chain A: E.492, E.495, N.499, T.501
- Ligands: SO4.16
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.492, A:N.499, A:T.501, A:T.501
NAG.30: 1 residues within 4Å:- Chain B: N.38
No protein-ligand interaction detected (PLIP)NAG.31: 6 residues within 4Å:- Chain A: S.232
- Chain B: N.180, N.251, D.252, A.253
- Ligands: SO4.27
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.180
NAG.32: 1 residues within 4Å:- Chain B: N.169
No protein-ligand interaction detected (PLIP)NAG.36: 5 residues within 4Å:- Chain B: E.492, E.495, N.499, T.501
- Ligands: SO4.34
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.492, B:N.499, B:T.501, B:T.501
NAG.48: 1 residues within 4Å:- Chain C: N.38
No protein-ligand interaction detected (PLIP)NAG.49: 6 residues within 4Å:- Chain B: S.232
- Chain C: N.180, N.251, D.252, A.253
- Ligands: SO4.45
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.180
NAG.50: 1 residues within 4Å:- Chain C: N.169
No protein-ligand interaction detected (PLIP)NAG.54: 5 residues within 4Å:- Chain C: E.492, E.495, N.499, T.501
- Ligands: SO4.52
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:E.492, C:N.499, C:T.501, C:T.501
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Antanasijevic, A. et al., Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography. J.Struct.Biol. (2020)
- Release Date
- 2019-11-13
- Peptides
- Hemagglutinin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.87 Å
- Oligo State
- homo-trimer
- Ligands
- 33 x SO4: SULFATE ION(Non-functional Binders)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- 12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Antanasijevic, A. et al., Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography. J.Struct.Biol. (2020)
- Release Date
- 2019-11-13
- Peptides
- Hemagglutinin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A