SMTL ID : 6pma.1

TRK-A IN COMPLEX WITH LIGAND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

monomer

Ligands

1 x OQS: N-[2-chloro-5-(trifluoromethyl)phenyl]-2-[1-(4-methoxyphenyl)-4-oxo-1,4-dihydro-5H-pyrazolo[3,4-d]pyrimidin-5-yl]acetamide(Non-covalent)

OQS.1: 20 residues within 4Å: Chain A: V.40, A.58, K.60, E.76, L.80, L.83, I.88, V.89, F.105, E.106, Y.107, M.108, L.157, F.162, H.164, L.173, I.182, G.183, D.184, F.185 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.58, A:L.80, A:F.162, A:L.173, A:D.184, A:F.185 Hydrogen bonds: A:E.76, A:M.108, A:D.184 Water bridges: A:G.186 pi-Stacking: A:F.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramanian, G. et al., Synthetic inhibitor leads of human tropomyosin receptor kinase A ( h TrkA). Rsc Med Chem (2020)

Release Date

2020-02-26

Peptides

High affinity nerve growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

High affinity nerve growth factor receptor

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