SMTL ID : 6pmb.1

TRK-A IN COMPLEX WITH LIGAND 1a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

monomer

Ligands

1 x OQM: 2-[5,7-dimethyl-2-(pyridin-3-yl)[1,2,4]triazolo[1,5-a]pyrimidin-6-yl]-N-[3-(trifluoromethyl)phenyl]acetamide(Non-covalent)

OQM.1: 19 residues within 4Å: Chain A: A.58, K.60, E.76, L.79, L.80, L.83, I.88, V.89, F.105, E.106, Y.107, M.108, F.162, H.164, L.173, I.182, G.183, D.184, F.185 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:E.76, A:L.79, A:L.80, A:L.80, A:V.89, A:F.105, A:F.105, A:L.173, A:D.184, A:F.185 Hydrogen bonds: A:E.76, A:E.76, A:M.108, A:D.184 pi-Stacking: A:F.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramanian, G. et al., Synthetic inhibitor leads of human tropomyosin receptor kinase A ( h TrkA). Rsc Med Chem (2020)

Release Date

2020-02-26

Peptides

High affinity nerve growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

High affinity nerve growth factor receptor

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