SMTL ID : 6pnn.1

Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-(2-methoxyethyl)-N-methylsulfamoyl)phenyl)acetamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.38, H.48, V.50, L.214 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.38 Salt bridges: A:R.38, A:H.48 SO4.2: 4 residues within 4Å: Chain A: E.20, G.21, S.77, Q.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.21, A:S.77, A:Q.78, A:Q.78 Water bridges: A:N.76, A:Y.96 SO4.5: 4 residues within 4Å: Chain B: R.38, H.48, V.50, L.214 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.38 Salt bridges: B:R.38, B:H.48 SO4.6: 4 residues within 4Å: Chain B: E.20, G.21, S.77, Q.78 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.21, B:S.77, B:Q.78, B:Q.78 Water bridges: B:N.76

2 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.3: 7 residues within 4Å: Chain A: F.33, L.70, V.71, P.72, E.84, S.85 Ligands: OR7.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.84, A:S.85 Water bridges: A:N.66, A:E.84, A:E.84 TLA.7: 7 residues within 4Å: Chain B: F.33, L.70, V.71, P.72, E.84, S.85 Ligands: OR7.8 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.85 Water bridges: B:N.66, B:E.84, B:E.84

2 x OR7: 2-chloro-N-{4-chloro-3-[(2-methoxyethyl)(methyl)sulfamoyl]phenyl}acetamide(Covalent)

OR7.4: 11 residues within 4Å: Chain A: M.28, C.31, P.32, F.33, V.71, V.126, G.127, I.130, F.224, Y.228 Ligands: TLA.3 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.71 Water bridges: A:V.71 OR7.8: 11 residues within 4Å: Chain B: M.28, C.31, P.32, F.33, V.71, V.126, G.127, I.130, F.224, Y.228 Ligands: TLA.7 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:V.71 Water bridges: B:V.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, Y. et al., Development of Benzenesulfonamide Derivatives as Potent Glutathione Transferase Omega-1 Inhibitors. J.Med.Chem. (2020)

Release Date

2019-07-24

Peptides

Glutathione S-transferase omega-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutathione S-transferase omega-1

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