SMTL ID : 6qa3.1

ERK2 mini-fragment binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Y.195, R.199, R.202, H.240, Y.241 5 PLIP interactions: 5 interactions with chain A Water bridges: A:Y.195, A:Y.241, A:Y.241 Salt bridges: A:R.199, A:R.202

2 x PZO: PYRAZOLE(Non-covalent)

PZO.2: 7 residues within 4Å: Chain A: A.60, K.62, Q.113, D.114, L.115, M.116, L.164 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.60 Hydrogen bonds: A:D.114, A:M.116 PZO.3: 9 residues within 4Å: Chain A: K.62, I.64, T.76, E.79, I.80, L.83, I.94, I.111, Q.113 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:E.79, A:L.83, A:I.111 Hydrogen bonds: A:K.62 Water bridges: A:K.62, A:E.79, A:E.79, A:E.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

O'Reilly, M. et al., Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design. Drug Discov Today (2019)

Release Date

2019-06-26

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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