SMTL ID : 6qgg.1

Structure of human Bcl-2 in complex with analogue of ABT-737

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x J1H: [(3~{R})-3-[[4-[[4-[4-[[2-(4-chlorophenyl)phenyl]methyl]piperazin-1-yl]phenyl]carbonylsulfamoyl]-2-nitro-phenyl]amino]-4-phenylsulfanyl-butyl]-(2-hydroxy-2-oxoethyl)-dimethyl-azanium(Non-covalent)

J1H.1: 19 residues within 4Å: Chain A: A.52, D.55, F.56, R.59, Y.60, D.63, F.64, M.67, V.85, L.89, N.95, W.96, G.97, R.98, V.100, A.101, F.105, F.150, Y.154 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.56, A:F.56, A:Y.60, A:M.67, A:V.85, A:L.89, A:R.98, A:V.100, A:F.105 Hydrogen bonds: A:N.95, A:W.96, A:W.96, A:G.97, A:Y.154, A:Y.154 Water bridges: A:N.95 Salt bridges: A:D.55, A:D.63 pi-Stacking: A:Y.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, J.B. et al., Establishing Drug Discovery and Identification of Hit Series for the Anti-apoptotic Proteins, Bcl-2 and Mcl-1. Acs Omega (2019)

Release Date

2019-06-12

Peptides

Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2,Bcl-2-like protein 1

Related Entries With Identical Sequence