SMTL ID : 6qm0.1 (1 other biounit)

Cathepsin-K in complex with amino-oxaazabicyclo[3.3.0]octanyl containing inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x MHA: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID(Non-covalent)

MHA.1: 5 residues within 4Å: Chain A: S.5, V.6, D.7, K.10, K.11 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.7, A:D.7 Water bridges: A:S.5, A:S.5, A:S.5, A:S.5, A:S.5 Salt bridges: A:K.10, A:K.11

1 x J6B: ~{N}-[(2~{S})-1-[(3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-azanyl-3-oxidanyl-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-fluoranyl-4-[2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide(Non-covalent)

J6B.2: 17 residues within 4Å: Chain A: Q.20, G.24, S.25, C.26, W.27, E.60, N.61, D.62, G.65, G.66, G.67, Y.68, M.69, A.135, N.162, H.163, L.210 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.68, A:A.135, A:L.210 Hydrogen bonds: A:Q.20, A:C.26, A:G.67, A:G.67, A:N.162 Water bridges: A:C.23 Salt bridges: A:D.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Derbyshire, D.J., Successful development of 3-oxohexahydrofuropyrrole amino acid amides as inhibitors of Cathepsin-K. To Be Published

Release Date

2020-02-19

Peptides

Cathepsin K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin K

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