SMTL ID : 6r0n.1

Histone fold domain of AtNF-YB2/NF-YC3 in I2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: F.50, G.53, E.54, D.57, L.79 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.54, A:E.54, A:D.57 Water bridges: A:E.54, A:E.54, A:D.57 GOL.2: 5 residues within 4Å: Chain A: D.70, W.74, T.77, V.85, K.89 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.70, A:T.77, A:T.77, A:K.89 Water bridges: A:D.70, A:K.89 GOL.3: 6 residues within 4Å: Chain A: R.7, Q.9, F.12, E.38, Q.41, E.42 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.7, A:Q.9, A:E.42, A:E.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaves-Sanjuan, A. et al., Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants. Plant J. (2021)

Release Date

2020-09-30

Peptides

NF-YB2: A
NF-YC3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NF-YB2

NF-YC3

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