SMTL ID : 6rmp.1

Human Carbonic Anhydrase II in complex with fragment.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.22 Å

Oligo State

monomer

Ligands

1 x BE7: (4-CARBOXYPHENYL)(CHLORO)MERCURY(Non-covalent)

BE7.1: 5 residues within 4Å: Chain A: Q.140, Q.141, P.142, E.209, C.210 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:P.142 Metal complexes: A:C.210, H2O.4

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: Y.12, P.18, D.247, W.249, P.251 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.247 pi-Cation interactions: A:W.249, A:W.249

1 x 47S: 3-(dimethylamino)benzohydrazide(Non-covalent)

47S.3: 14 residues within 4Å: Chain A: Q.97, H.99, H.101, H.124, V.126, F.135, L.145, V.147, L.202, T.203, T.204, V.211, W.213 Ligands: ZN.4 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.126, A:L.145, A:V.147, A:L.202, A:L.202 Hydrogen bonds: A:T.203, A:T.203, A:T.204, A:T.204

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 6 residues within 4Å: Chain A: H.99, H.101, E.111, H.124, T.203 Ligands: 47S.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.99, A:H.101, A:H.124, 47S.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Glockner, S. et al., A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II. Biomolecules (2020)

Release Date

2020-04-15

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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