- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.49 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x CMO: CARBON MONOXIDE(Non-functional Binders)
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.2: 19 residues within 4Å:- Chain A: M.33, Y.43, F.44, H.46, W.47, T.63, V.64, G.67, I.68, L.85, Q.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138
- Ligands: CMO.1
17 PLIP interactions:16 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:Y.43, A:F.44, A:F.44, A:W.47, A:T.63, A:I.68, A:L.85, A:L.93, A:L.93, A:V.95, A:V.95, A:L.103, A:L.138
- Hydrogen bonds: A:Q.88
- Salt bridges: A:H.46
- Metal complexes: A:H.89, CMO.1
HEM.7: 17 residues within 4Å:- Chain B: T.38, H.41, F.42, K.59, H.63, K.66, V.67, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141
- Ligands: CMO.6
19 PLIP interactions:18 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: B:H.41, B:F.42, B:K.66, B:V.67, B:V.67, B:L.88, B:L.91, B:L.96, B:L.96, B:V.98, B:V.98, B:F.103, B:F.103, B:L.141
- Water bridges: B:K.59
- Salt bridges: B:K.59
- pi-Cation interactions: B:H.92
- Metal complexes: B:H.92, CMO.6
HEM.11: 19 residues within 4Å:- Chain C: M.33, Y.43, F.44, H.46, W.47, T.63, V.64, G.67, I.68, L.85, Q.88, H.89, L.93, V.95, N.99, F.100, L.103, L.138
- Ligands: CMO.10
17 PLIP interactions:16 interactions with chain C, 1 Ligand-Ligand interactions- Hydrophobic interactions: C:Y.43, C:F.44, C:F.44, C:W.47, C:T.63, C:I.68, C:L.85, C:L.93, C:L.93, C:V.95, C:V.95, C:L.103, C:L.138
- Hydrogen bonds: C:Q.88
- Salt bridges: C:H.46
- Metal complexes: C:H.89, CMO.10
HEM.16: 17 residues within 4Å:- Chain D: T.38, H.41, F.42, K.59, H.63, K.66, V.67, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141
- Ligands: CMO.15
18 PLIP interactions:18 interactions with chain D,- Hydrophobic interactions: D:H.41, D:F.42, D:K.66, D:V.67, D:V.67, D:L.88, D:L.91, D:L.96, D:L.96, D:V.98, D:V.98, D:F.103, D:F.103, D:L.141
- Water bridges: D:K.59
- Salt bridges: D:K.59
- pi-Cation interactions: D:H.92
- Metal complexes: D:H.92
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 2 residues within 4Å:- Chain A: W.47, H.60
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:W.47
- Salt bridges: A:H.60
SO4.4: 5 residues within 4Å:- Chain A: H.56, V.57, K.58, A.59
- Chain D: S.13
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain D- Hydrogen bonds: A:K.58, A:A.59, D:S.13
- Water bridges: D:S.13, D:S.13
SO4.8: 6 residues within 4Å:- Chain B: G.43, S.44, F.45, G.46, N.57, K.59
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:F.45, B:G.46, B:N.57
- Water bridges: B:G.43, B:G.43, B:S.44, B:S.44, B:K.59
SO4.9: 4 residues within 4Å:- Chain B: S.17, K.117, M.118
- Chain C: K.58
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain C- Hydrogen bonds: B:S.17
- Water bridges: B:K.117, C:K.58, C:K.58
- Salt bridges: B:K.117, C:K.58
SO4.12: 2 residues within 4Å:- Chain C: W.47, H.60
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:W.47
- Salt bridges: C:H.60
SO4.13: 5 residues within 4Å:- Chain B: S.13
- Chain C: H.56, V.57, K.58, A.59
5 PLIP interactions:2 interactions with chain C, 3 interactions with chain B- Hydrogen bonds: C:K.58, C:A.59, B:S.13
- Water bridges: B:S.13, B:S.13
SO4.17: 6 residues within 4Å:- Chain D: G.43, S.44, F.45, G.46, N.57, K.59
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:F.45, D:G.46, D:N.57
- Water bridges: D:G.43, D:G.43, D:S.44, D:S.44, D:K.59
SO4.18: 4 residues within 4Å:- Chain A: K.58
- Chain D: S.17, K.117, M.118
6 PLIP interactions:3 interactions with chain D, 3 interactions with chain A- Hydrogen bonds: D:S.17
- Water bridges: D:K.117, A:K.58, A:K.58
- Salt bridges: D:K.117, A:K.58
- 2 x DTN: DITHIONITE(Non-covalent)
DTN.5: 8 residues within 4Å:- Chain A: P.52, G.53, H.56
- Chain C: P.52, G.53
- Chain D: N.123, P.124
- Ligands: DTN.14
No protein-ligand interaction detected (PLIP)DTN.14: 8 residues within 4Å:- Chain A: P.52, G.53
- Chain B: N.123, P.124
- Chain C: P.52, G.53, H.56
- Ligands: DTN.5
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Balasco, N. et al., The unique structural features of carbonmonoxy hemoglobin from the sub-Antarctic fish Eleginops maclovinus. Sci Rep (2019)
- Release Date
- 2019-12-25
- Peptides
- Hemoglobin subunit alpha 1: AC
Hemoglobin subunit beta-1: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.49 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x CMO: CARBON MONOXIDE(Non-functional Binders)
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 2 x DTN: DITHIONITE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Balasco, N. et al., The unique structural features of carbonmonoxy hemoglobin from the sub-Antarctic fish Eleginops maclovinus. Sci Rep (2019)
- Release Date
- 2019-12-25
- Peptides
- Hemoglobin subunit alpha 1: AC
Hemoglobin subunit beta-1: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B