SMTL ID : 6s6q.1 (1 other biounit)

Crystal structure of the LRR ectodomain of the plant membrane receptor kinase GASSHO1/SCHENGEN3 from Arabidopsis thaliana in complex with CASPARIAN STRIP INTEGRITY FACTOR 2.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: E.191, N.215 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 9 residues within 4Å: Chain A: D.353, S.355, N.356, H.379 Chain B: V.12, R.13, P.14 Ligands: NAG-NAG.3, NAG-NAG.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.13 NAG-NAG.3: 4 residues within 4Å: Chain A: N.356, N.380, H.404 Ligands: NAG-NAG.2 No protein-ligand interaction detected (PLIP)

12 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: N.64, D.88, F.112 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.112 NAG.5: 6 residues within 4Å: Chain A: E.211, N.232, A.234, N.235, M.258 Chain B: P.7 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:A.234, B:P.7 Hydrogen bonds: A:E.211, A:N.235 NAG.6: 2 residues within 4Å: Chain A: S.298, N.321 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.298 NAG.7: 5 residues within 4Å: Chain A: E.365, F.368, E.369, S.390, N.393 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.369 Hydrogen bonds: A:S.390 NAG.8: 1 residues within 4Å: Chain A: N.524 No protein-ligand interaction detected (PLIP) NAG.9: 3 residues within 4Å: Chain A: K.515, G.516, N.540 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.515 Hydrogen bonds: A:N.540 NAG.10: 3 residues within 4Å: Chain A: G.529, N.552, E.575 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.552 NAG.11: 1 residues within 4Å: Chain A: N.695 No protein-ligand interaction detected (PLIP) NAG.12: 2 residues within 4Å: Chain A: N.766, Q.790 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.766 NAG.13: 8 residues within 4Å: Chain A: H.788, Y.807, N.809, S.811, F.812, P.827, D.829, S.830 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:P.827, A:D.829 Hydrogen bonds: A:H.788, A:Y.807, A:N.809, A:S.811, A:D.829, A:D.829 NAG.14: 2 residues within 4Å: Chain A: N.200, R.224 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.224, A:R.224 NAG.15: 2 residues within 4Å: Chain A: E.438, N.441 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.419, A:E.438, A:N.441, A:R.465, A:R.465

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okuda, S. et al., Molecular mechanism for the recognition of sequence-divergent CIF peptides by the plant receptor kinases GSO1/SGN3 and GSO2. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-01-29

Peptides

LRR receptor-like serine/threonine-protein kinase GSO1: A
Protein CASPARIAN STRIP INTEGRITY FACTOR 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

LRR receptor-like serine/threonine-protein kinase GSO1

Protein CASPARIAN STRIP INTEGRITY FACTOR 2

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