SMTL ID : 6s9m.6 (5 other biounits)

Designed Armadillo Repeat protein Lock2 fused to target peptide KRKRKAKITW

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: P.100, E.102 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.100, A:E.102, H2O.1 CA.2: 2 residues within 4Å: Chain A: P.16, Q.18 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:P.16, H2O.4, H2O.5 CA.3: 2 residues within 4Å: Chain A: P.226, E.228 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:P.226, A:E.228, A:E.228, H2O.2, H2O.4

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: N.120, E.121, Q.124, E.163, Q.164 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.164 Water bridges: A:N.120, A:Q.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ernst, P. et al., Structure-Guided Design of a Peptide Lock for Modular Peptide Binders. Acs Chem.Biol. (2020)

Release Date

2020-02-19

Peptides

Lock2_KRKRKAKITW: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Lock2_KRKRKAKITW

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