SMTL ID : 6sbm.1

Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.95 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.99, H.101, E.111, H.124, T.203 Ligands: L4W.6 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.99, A:H.101, A:H.124

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: Y.12, P.18, D.247, W.249, P.251 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.247 pi-Cation interactions: A:W.249, A:W.249

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: T.42, A.43, K.44, Q.259, I.260 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.42 NA.4: 2 residues within 4Å: Chain A: S.78, Q.79 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.78, A:S.78

2 x L4W: 4-pentoxybenzenesulfonamide(Non-covalent)

L4W.5: 9 residues within 4Å: Chain A: H.9, W.10, H.15, N.16, H.20, W.21, K.23, D.24, F.25 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.21, A:D.24, A:D.24 L4W.6: 15 residues within 4Å: Chain A: Q.97, H.99, H.101, H.124, V.126, F.135, V.139, V.147, L.202, T.203, T.204, P.206, L.208, W.213 Ligands: ZN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.126, A:F.135, A:V.139, A:L.202, A:L.202, A:P.206 Hydrogen bonds: A:T.203, A:T.203

1 x BE7: (4-CARBOXYPHENYL)(CHLORO)MERCURY(Non-covalent)

BE7.7: 7 residues within 4Å: Chain A: V.139, Q.140, Q.141, P.142, L.208, E.209, C.210 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.142 Metal complexes: A:Q.141, A:E.209, A:C.210

1 x FLC: CITRATE ANION(Non-covalent)

FLC.8: 1 residues within 4Å: Chain A: K.44 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.44, A:K.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloeckner, S. et al., Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide. To Be Published

Release Date

2020-08-26

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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