SMTL ID : 6sdj.1

Human Carbonic Anhydrase II in complex with (R)-1-aminopropan-2-ol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.99, H.101, E.111, H.124, T.203 Ligands: J3K.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.99, A:H.101, A:H.124

1 x J3K: (2~{R})-1-azanylpropan-2-ol(Non-covalent)

J3K.2: 11 residues within 4Å: Chain A: H.99, H.101, H.124, V.126, V.147, L.202, T.203, T.204, V.211, W.213 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.147, A:L.202 Hydrogen bonds: A:T.203, A:T.203, A:T.204, A:T.204 Water bridges: A:T.204

2 x HG: MERCURY (II) ION(Non-covalent)

HG.3: 7 residues within 4Å: Chain A: V.139, Q.140, Q.141, L.208, E.209, C.210 Ligands: BE7.6 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.210 HG.4: 5 residues within 4Å: Chain A: H.9, W.10, N.67, G.68, H.69 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:N.67, A:H.69, H2O.1, H2O.6

2 x BE7: (4-CARBOXYPHENYL)(CHLORO)MERCURY(Non-covalent)

BE7.5: 7 residues within 4Å: Chain A: G.11, Y.12, G.13, H.15, N.16, F.235, E.243 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.235, A:E.243 Hydrogen bonds: A:Y.12, A:G.13, A:N.16 BE7.6: 7 residues within 4Å: Chain A: Q.140, Q.141, P.142, L.208, E.209, C.210 Ligands: HG.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.142 Metal complexes: A:Q.141, A:C.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Glockner, S. et al., A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II. Biomolecules (2020)

Release Date

2020-04-15

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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