SMTL ID : 6sdl.1

Human Carbonic Anhydrase II in complex with (R)-N-(3-(1H-indol-1-yl)-2-methylpropyl)-4-sulfamoylbenzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.08 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.99, H.101, E.111, H.124, T.203 Ligands: SBR.6 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.99, A:H.101, A:H.124

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 5 residues within 4Å: Chain A: Y.12, P.18, D.247, W.249, P.251 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.247 pi-Cation interactions: A:W.249, A:W.249

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: T.42, A.43, K.44, Q.259 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.42 Water bridges: A:K.44, A:Q.259

1 x HG: MERCURY (II) ION(Non-covalent)

HG.4: 7 residues within 4Å: Chain A: V.139, Q.141, P.142, L.208, E.209, C.210 Ligands: BE7.5 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.209, A:C.210

1 x BE7: (4-CARBOXYPHENYL)(CHLORO)MERCURY(Covalent)

BE7.5: 8 residues within 4Å: Chain A: V.139, Q.140, Q.141, P.142, L.208, E.209, C.210 Ligands: HG.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.210

1 x SBR: (R)-N-(3-INDOL-1-YL-2-METHYL-PROPYL)-4-SULFAMOYL-BENZAMIDE(Non-covalent)

SBR.6: 16 residues within 4Å: Chain A: Q.97, H.99, H.101, H.124, V.126, F.135, G.136, V.139, V.147, L.202, T.203, T.204, P.206, L.208, W.213 Ligands: ZN.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.126, A:F.135, A:F.135, A:L.202, A:L.202, A:L.202 Hydrogen bonds: A:T.203, A:T.203 Water bridges: A:Q.97, A:T.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloeckner, S. et al., Human Carbonic Anhydrase II in complex with (R)-N-(3-(1H-indol-1-yl)-2-methylpropyl)-4-sulfamoylbenzamide. To Be Published

Release Date

2020-08-26

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

Related Entries With Identical Sequence