SMTL ID : 6sey.1

Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.99, H.101, H.124, T.203 Ligands: L9B.7 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.99, A:H.101, A:H.124

1 x HG: MERCURY (II) ION(Non-covalent)

HG.2: 7 residues within 4Å: Chain A: V.139, Q.140, Q.141, L.208, E.209, C.210 Ligands: BE7.3 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.210, H2O.6

1 x BE7: (4-CARBOXYPHENYL)(CHLORO)MERCURY(Non-covalent)

BE7.3: 6 residues within 4Å: Chain A: Q.140, Q.141, P.142, E.209, C.210 Ligands: HG.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:P.142, A:P.142 Metal complexes: A:Q.141, A:C.210, H2O.6

2 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.4: 3 residues within 4Å: Chain A: K.44, Q.259, K.261 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.44, A:Q.259, A:Q.259, A:K.261 Water bridges: A:Q.259 BGC.5: 7 residues within 4Å: Chain A: D.57, Q.58, A.59, N.182, F.183, D.184, R.186 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.57, A:D.57, A:N.182, A:R.186 Water bridges: A:A.59, A:N.182

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.6: 6 residues within 4Å: Chain A: K.163, D.179, F.180, T.181, N.182, F.183 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.163, A:D.179, A:T.181, A:N.182 Water bridges: A:T.181, A:T.181 Salt bridges: A:K.163

2 x L9B: 4-(4-oxidanylbutyl)benzenesulfonamide(Non-covalent)

L9B.7: 14 residues within 4Å: Chain A: Q.97, H.99, H.101, H.124, V.126, F.135, V.139, V.147, L.202, T.203, T.204, P.206, W.213 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.126, A:F.135, A:L.202, A:L.202 Hydrogen bonds: A:T.203, A:T.203 Water bridges: A:T.204 L9B.8: 9 residues within 4Å: Chain A: H.9, W.10, H.15, N.16, H.20, W.21, K.23, D.24, F.25 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:N.16 Hydrogen bonds: A:D.24, A:D.24, A:D.24

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloeckner, S. et al., Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide. To Be Published

Release Date

2020-08-26

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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