SMTL ID : 6slr.1 (1 other biounit)

Structure of saposin B in complex with atovaquone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

homo-dimer

Ligands

1 x AOQ: 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione(Non-covalent)

AOQ.1: 4 residues within 4Å: Chain A: R.41 Chain B: M.64, M.68, L.76 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.76 Water bridges: A:R.41

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: L.42, M.46 Chain B: Y.57 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zubieta, C. et al., Structure of saposin B in complex with atovaquone. To Be Published

Release Date

2020-09-09

Peptides

Prosaposin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Prosaposin

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