- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x LR2: ~{N}-pyridin-2-yl-2-selanyl-benzamide(Non-covalent)
LR2.2: 7 residues within 4Å:- Chain A: L.106, S.107, G.108, C.111, I.113
- Chain B: I.113
- Ligands: LR2.13
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:I.113
- Hydrogen bonds: A:G.108
- Water bridges: A:G.108, A:G.108
LR2.13: 6 residues within 4Å:- Chain B: L.106, S.107, G.108, C.111, I.113
- Ligands: LR2.2
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.108
- 10 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 2 residues within 4Å:- Chain A: K.75, D.76
4 PLIP interactions:4 interactions with chain A- Water bridges: A:D.76, A:D.76, A:K.128
- Salt bridges: A:K.75
SO4.5: 4 residues within 4Å:- Chain A: E.40, G.41, L.42, A.123
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:L.42
- Water bridges: A:A.123
SO4.6: 5 residues within 4Å:- Chain A: E.133, T.137, N.139, A.140, G.141
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:T.137, A:N.139, A:A.140, A:G.141
- Water bridges: A:T.137, A:G.141
- Salt bridges: A:K.122
SO4.7: 2 residues within 4Å:- Chain A: N.19, W.32
3 PLIP interactions:3 interactions with chain A- Water bridges: A:K.3, A:K.3
- Salt bridges: A:K.3
SO4.8: 3 residues within 4Å:- Chain A: T.58, S.142, R.143
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.58, A:R.143
- Water bridges: A:R.143
- Salt bridges: A:R.143
SO4.15: 3 residues within 4Å:- Chain B: K.122, A.123
- Ligands: SO4.18
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:A.123
SO4.16: 3 residues within 4Å:- Chain B: T.58, S.142, R.143
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.143
SO4.17: 2 residues within 4Å:- Chain B: N.19, W.32
2 PLIP interactions:2 interactions with chain B- Water bridges: B:W.32
- Salt bridges: B:K.3
SO4.18: 5 residues within 4Å:- Chain B: E.40, G.41, L.42, A.123
- Ligands: SO4.15
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:L.42
- Water bridges: B:A.123
SO4.19: 7 residues within 4Å:- Chain B: H.48, H.63, H.120, T.137, G.141, R.143
- Ligands: ZN.14
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:H.63, B:T.137
- Water bridges: B:G.141, B:R.143, B:R.143, B:R.143, B:R.143
- Salt bridges: B:H.48, B:H.120, B:R.143
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chantadul, V. et al., Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol (2020)
- Release Date
- 2020-03-18
- Peptides
- Superoxide dismutase [Cu-Zn]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
IB
J
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x LR2: ~{N}-pyridin-2-yl-2-selanyl-benzamide(Non-covalent)
- 10 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chantadul, V. et al., Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy. Commun Biol (2020)
- Release Date
- 2020-03-18
- Peptides
- Superoxide dismutase [Cu-Zn]: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
IB
J