SMTL ID : 6szh.1

Acinetobacter baumannii undecaprenyl pyrophosphate synthase (AB-UppS) in complex with GW197

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain B: D.180, D.182 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.180, B:D.180, B:D.182, H2O.3

1 x M2H: 3,5-dimethyl-1~{H}-pyrrole-2-carbonitrile(Non-covalent)

M2H.2: 12 residues within 4Å: Chain A: I.213 Chain B: I.36, L.204, R.212, I.213, S.214, N.215, F.216, L.217, L.218, A.221, L.226 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.204, B:A.221, B:L.226, A:I.213 Hydrogen bonds: B:S.214, B:F.216, B:F.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thorpe, J.H. et al., Cocktailed fragment screening by X-ray crystallography of the antibacterial target undecaprenyl pyrophosphate synthase from Acinetobacter baumannii. Acta Crystallogr.,Sect.F (2020)

Release Date

2020-01-22

Peptides

Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)

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