SMTL ID : 6tnq.1 (2 other biounits)

Crystal structure of the human Arc N-lobe bound to repeat 4 from GKAP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x SER- PRO- LYS- PHE- ARG- SER: Chains: B,D,F(Non-covalent)

SER-PRO-LYS-PHE-ARG-SER.1: 21 residues within 4Å: Chain A: T.9, Q.10, I.11, F.12, E.13, D.14, P.15, F.18, H.21, L.22, Y.25, N.42, H.43, M.44, N.45, G.46, P.47, A.48, F.69, Y.72, S.73 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.11, A:F.12, A:P.15, A:F.18, A:F.18, A:A.48 Hydrogen bonds: A:Q.10, A:Q.10, A:F.12, A:F.12, A:E.13, A:E.13, A:H.43, A:H.43, A:N.45, A:N.45, A:A.48 Water bridges: A:Q.10, A:N.42, A:M.44 pi-Stacking: A:F.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hallin, E.I. et al., Structural properties and peptide ligand binding of the capsid homology domains of human Arc. Biochem Biophys Rep (2021)

Release Date

2021-01-13

Peptides

Activity-regulated cytoskeleton-associated protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Activity-regulated cytoskeleton-associated protein

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