SMTL ID : 6trf.1

Chaetomium thermophilum UDP-Glucose Glucosyl Transferase (UGGT) purified from cells treated with kifunensine.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.11 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN.1: 7 residues within 4Å: Chain A: N.36, T.38, I.39, G.73, H.74, I.657, H.660 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.2: 4 residues within 4Å: Chain A: E.317, G.320, N.321, N.874 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.874 NAG.3: 1 residues within 4Å: Chain A: N.1207 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.1207

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: D.1282, D.1284, Q.1285, D.1415 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.1282, A:D.1282, A:D.1282, A:D.1284, A:D.1415

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Modenutti, C.P. et al., Clamping, bending, and twisting inter-domain motions in the misfold-recognizing portion of UDP-glucose: Glycoprotein glucosyltransferase. Structure (2021)

Release Date

2020-01-08

Peptides

UDP-glucose-glycoprotein glucosyltransferase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glucose-glycoprotein glucosyltransferase-like protein

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