SMTL ID : 6u6i.1

NTD of GluA2 in complex with CNIH3 - with antagonist ZK200775 - in asymmetric global conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: R.206, G.232, H.234, N.256 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 6 residues within 4Å: Chain D: R.205, R.206, G.232, Y.233, H.234, N.256 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:R.206

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.2: 6 residues within 4Å: Chain B: Y.143, Q.144, R.206, G.232, H.234, N.256 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.144 NAG-NAG-BMA.3: 5 residues within 4Å: Chain C: R.206, G.232, Y.233, H.234, N.256 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 4 residues within 4Å: Chain C: Q.352, E.354, N.359, N.370 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.354, C:N.370

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakagawa, T., Structures of the AMPA receptor in complex with its auxiliary subunit cornichon. Science (2019)

Release Date

2019-12-04

Peptides

Glutamate receptor 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

C
B

D
D

Glutamate receptor 2

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