- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-4-4-mer
- Ligands
- 4 x ZK1: {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid(Non-covalent)
- 4 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
OLC.2: 18 residues within 4Å:- Chain A: I.550, V.551, Y.554, I.555, S.558, V.559, F.562, R.566
- Chain D: L.69, S.73
- Chain H: S.616, L.617, R.620, I.621, G.624, V.625, W.627, F.628
8 PLIP interactions:2 interactions with chain H, 5 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: H:I.621, H:F.628, A:Y.554, A:I.555, A:V.559, A:F.562, A:F.562, D:L.69
OLC.5: 17 residues within 4Å:- Chain A: S.616, L.617, R.620, I.621, G.624, V.625, W.627, F.628
- Chain B: V.551, Y.554, I.555, S.558, V.559, F.562, R.566
- Chain E: L.69, S.73
6 PLIP interactions:1 interactions with chain E, 4 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: E:L.69, B:Y.554, B:Y.554, B:F.562, B:F.562, A:I.621
OLC.10: 17 residues within 4Å:- Chain B: S.616, L.617, R.620, I.621, G.624, V.625, W.627, F.628
- Chain F: L.69, S.73
- Chain G: V.551, Y.554, I.555, S.558, V.559, F.562, R.566
7 PLIP interactions:5 interactions with chain G, 1 interactions with chain B, 1 interactions with chain F- Hydrophobic interactions: G:Y.554, G:V.559, G:F.562, G:F.562, B:I.621, F:L.69
- Hydrogen bonds: G:R.566
OLC.12: 17 residues within 4Å:- Chain C: L.69, S.73
- Chain G: S.616, L.617, R.620, I.621, G.624, V.625, W.627, F.628
- Chain H: V.551, Y.554, I.555, S.558, V.559, F.562, R.566
6 PLIP interactions:4 interactions with chain H, 1 interactions with chain G, 1 interactions with chain C- Hydrophobic interactions: H:Y.554, H:Y.554, H:F.562, H:F.562, G:I.621, C:L.69
- 4 x CLR: CHOLESTEROL(Non-covalent)
CLR.3: 13 residues within 4Å:- Chain A: Y.818, V.821, G.822, G.825, L.826, M.828, L.829
- Chain C: M.11, L.14, V.15, A.18, M.153, L.157
6 PLIP interactions:1 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:A.18, A:Y.818, A:Y.818, A:V.821, A:L.829
- Hydrogen bonds: A:Y.818
CLR.6: 12 residues within 4Å:- Chain B: Y.818, V.821, G.822, G.825, M.828, L.829
- Chain D: M.11, L.14, V.15, A.18, M.153, L.157
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain B- Hydrophobic interactions: D:L.14, D:A.18, D:L.157, B:Y.818, B:V.821
CLR.7: 13 residues within 4Å:- Chain E: M.11, L.14, V.15, A.18, M.153, L.157
- Chain G: Y.818, V.821, G.822, G.825, L.826, M.828, L.829
7 PLIP interactions:3 interactions with chain G, 4 interactions with chain E- Hydrophobic interactions: G:L.829, E:L.14, E:V.15, E:A.18, E:L.157
- Hydrogen bonds: G:Y.818, G:Y.818
CLR.8: 14 residues within 4Å:- Chain F: M.11, L.14, V.15, A.18, F.146, M.153, I.154, L.157
- Chain H: Y.818, V.821, G.822, G.825, M.828, L.829
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain H- Hydrophobic interactions: F:L.14, F:A.18, F:L.157
- Hydrogen bonds: H:Y.818
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakagawa, T., Structures of the AMPA receptor in complex with its auxiliary subunit cornichon. Science (2019)
- Release Date
- 2019-12-04
- Peptides
- Glutamate receptor 2: ABGH
Protein cornichon homolog 3: CDEF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BG
CH
DC
ED
FE
GF
H - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-4-4-mer
- Ligands
- 4 x ZK1: {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid(Non-covalent)
- 4 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
- 4 x CLR: CHOLESTEROL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakagawa, T., Structures of the AMPA receptor in complex with its auxiliary subunit cornichon. Science (2019)
- Release Date
- 2019-12-04
- Peptides
- Glutamate receptor 2: ABGH
Protein cornichon homolog 3: CDEF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BG
CH
DC
ED
FE
GF
H - Membrane
-
We predict this structure to be a membrane protein.