SMTL ID : 6u8l.1 (1 other biounit)

Discovery and optimization of salicyclic acid-derived sulfonamide inhibitors of the WDR5:MYC protein-protein interaction

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x Q1P: 3-{[(5-bromo-2-hydroxyphenyl)sulfonyl]amino}-5-cyclopropyl-6-fluoro-2-hydroxybenzoic acid(Non-covalent)

Q1P.1: 13 residues within 4Å: Chain A: S.193, P.194, N.195, Y.198, L.210, K.220, F.236, S.237, V.238, K.242, W.243, L.258, Q.259 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:P.194, A:Y.198, A:L.210, A:K.220, A:F.236, A:V.238, A:K.242, A:L.258, A:L.258 Hydrogen bonds: A:N.195, A:Q.259 Water bridges: A:Y.198, A:Y.198, A:K.242 Salt bridges: A:K.242 Halogen bonds: A:W.243

1 x Q1S: N-[2-(4-methylpiperazin-1-yl)-5-nitrophenyl]isoquinolin-1-amine(Non-covalent)

Q1S.2: 13 residues within 4Å: Chain A: A.17, S.19, S.20, A.35, I.60, S.61, D.62, F.103, S.145, Y.161, Y.230, C.231, I.275 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.17, A:A.35, A:F.103, A:I.275 Hydrogen bonds: A:S.61 Salt bridges: A:D.62 pi-Stacking: A:F.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Macdonald, J.D. et al., Discovery and Optimization of Salicylic Acid-Derived Sulfonamide Inhibitors of the WD Repeat-Containing Protein 5-MYC Protein-Protein Interaction. J.Med.Chem. (2019)

Release Date

2019-12-04

Peptides

WD repeat-containing protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

WD repeat-containing protein 5

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