SMTL ID : 6udv.2 (1 other biounit)

X-ray co-crystal structure of compound 3 bound to human Mcl-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

homo-dimer

Ligands

2 x Q51: (4S,7aR,9aR,10S,11E,14S,15R)-6'-chloro-10-hydroxy-14,15-dimethyl-3',4',7a,8,9,9a,10,13,14,15-decahydro-2'H,3H,5H-spiro[1,19-(ethanediylidene)-16lambda~6~-cyclobuta[i][1,4]oxazepino[3,4-f][1,2,7]thiadiazacyclohexadecine-4,1'-naphthalene]-16,16,18(7H,17H)-trione(Non-covalent)

Q51.1: 16 residues within 4Å: Chain A: H.54, A.57, F.58, M.61, V.79, M.80, V.83, F.84, R.93, T.96, L.97, F.100, G.101, L.120, I.124 Ligands: Q51.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:H.54, A:A.57, A:F.58, A:F.58, A:M.61, A:V.79, A:V.83, A:V.83, A:F.84, A:T.96, A:L.97, A:F.100 Hydrogen bonds: A:R.93 pi-Stacking: A:F.100 Q51.2: 16 residues within 4Å: Chain B: H.54, A.57, F.58, M.61, V.79, M.80, V.83, F.84, R.93, T.96, L.97, F.100, G.101, L.120, I.124 Ligands: Q51.1 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:H.54, B:A.57, B:F.58, B:F.58, B:M.61, B:V.79, B:V.83, B:V.83, B:F.84, B:T.96, B:L.97, B:F.100 Hydrogen bonds: B:R.93 Water bridges: B:T.96, B:T.96 pi-Stacking: B:F.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rescourio, G. et al., Discovery and in Vivo Evaluation of Macrocyclic Mcl-1 Inhibitors Featuring an alpha-Hydroxy Phenylacetic Acid Pharmacophore or Bioisostere. J.Med.Chem. (2019)

Release Date

2019-12-04

Peptides

Induced myeloid leukemia cell differentiation protein Mcl-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Induced myeloid leukemia cell differentiation protein Mcl-1

Related Entries With Identical Sequence