SMTL ID : 6uj7.1 (1 other biounit)

Crystal structure of HLA-B*07:02 with R140Q mutant IDH2 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x K: POTASSIUM ION(Non-covalent)

K.1: 1 residues within 4Å: Chain A: S.43 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.43, H2O.6

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: E.54, E.56, W.61 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.61 NA.3: 3 residues within 4Å: Chain B: N.103, H.104, L.107 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.103, B:N.103, B:H.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hwang, M.S. et al., Structural engineering of chimeric antigen receptors targeting HLA-restricted neoantigens. Nat Commun (2021)

Release Date

2021-05-05

Peptides

HLA class I histocompatibility antigen, B-7 alpha chain: A
Beta-2-microglobulin: B
Isocitrate dehydrogenase [NADP], mitochondrial: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HLA class I histocompatibility antigen, B-7 alpha chain

Beta-2-microglobulin

Isocitrate dehydrogenase [NADP], mitochondrial

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