SMTL ID : 6ulb.1

Sex Hormone-binding globulin mutant E176K in complex with Danazol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.50, E.52, A.160 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.50, A:E.52, A:A.160, H2O.1, H2O.3 CA.3: 3 residues within 4Å: Chain B: D.50, E.52, A.160 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.50, B:E.52, B:A.160, H2O.6, H2O.8

2 x QA1: Danazol(Non-covalent)

QA1.2: 22 residues within 4Å: Chain A: L.34, T.40, S.41, S.42, F.56, G.58, D.59, T.60, D.65, W.66, F.67, L.80, N.82, V.105, K.106, M.107, V.112, S.128, L.131, M.139, I.141, L.171 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.56, A:T.60, A:F.67, A:F.67, A:L.131, A:L.171 Hydrogen bonds: A:N.82 QA1.4: 22 residues within 4Å: Chain B: L.34, T.40, S.41, S.42, F.56, G.58, D.59, T.60, D.65, W.66, F.67, L.80, N.82, V.105, K.106, M.107, V.112, S.128, L.131, M.139, I.141, L.171 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:F.56, B:T.60, B:F.67, B:F.67, B:L.131, B:L.171 Hydrogen bonds: B:N.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Round, P.W. et al., Structural and biochemical analyses of danazol interactions with sex hormone-binding globulin and effects on androgen action. To Be Published

Release Date

2020-10-21

Peptides

Sex hormone-binding globulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Sex hormone-binding globulin

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