SMTL ID : 6vgv.1

Crystal structure of VidaL intein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: D.86, T.88 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.86, A:T.88 GOL.2: 5 residues within 4Å: Chain A: Y.35, Y.40, T.41, I.42, I.53 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.35, A:I.42, A:I.53 Water bridges: A:G.38 GOL.3: 4 residues within 4Å: Chain A: E.1, S.2, K.59, N.79 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.59, A:N.79 GOL.4: 1 residues within 4Å: Chain A: D.100 No protein-ligand interaction detected (PLIP) GOL.5: 3 residues within 4Å: Chain A: V.97, L.112, V.113 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.113 GOL.6: 3 residues within 4Å: Chain A: K.7, A.119, E.120 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.120, A:E.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burton, A.J. et al., Live-cell protein engineering with an ultra-short split intein. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-05-27

Peptides

VidaL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

VidaL

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