SMTL ID : 6vpq.4 (5 other biounits)

Crystal structure of the C-terminal domain of DENR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 1 residues within 4Å: Chain A: E.138 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.138, A:E.138, H2O.1, H2O.3 MG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 3 residues within 4Å: Chain A: I.120, P.121, A.123 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.130

1 x CA: CALCIUM ION(Non-functional Binders)

CA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lomakin, I.B. et al., Crystal structure of the C-terminal domain of DENR. Comput Struct Biotechnol J (2020)

Release Date

2020-04-08

Peptides

Density-regulated protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Density-regulated protein

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