SMTL ID : 6wvg.2 (1 other biounit)

human CD53

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.1: 8 residues within 4Å: Chain A: F.158, N.159, F.162, F.227, L.231, I.337, G.341, F.344 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.158, A:F.162, A:F.162, A:F.227, A:L.231, A:L.231, A:I.337, A:F.344, A:F.344

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: S.269, N.271 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, Y. et al., Open conformation of tetraspanins shapes interaction partner networks on cell membranes. Embo J. (2020)

Release Date

2020-09-16

Peptides

Green fluorescent protein, Leukocyte surface antigen CD53 chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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Green fluorescent protein, Leukocyte surface antigen CD53 chimera

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