SMTL ID : 6wzq.1 (1 other biounit)

Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P21 form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: G.48, R.49, Q.56 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.49 Water bridges: A:G.48 SO4.2: 6 residues within 4Å: Chain A: T.55, E.96, T.98, W.103, T.105 Chain B: A.109 No protein-ligand interaction detected (PLIP) SO4.3: 1 residues within 4Å: Chain B: R.35 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Q. et al., Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Sci. (2020)

Release Date

2020-05-27

Peptides

Nucleoprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nucleoprotein

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