SMTL ID : 6x4m.1

Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: tert-butyl [(2S)-1-{[(3S,17S)-2,16-dioxo-10,15-dioxa-1,21-diazatricyclo[15.3.1.1~5,9~]docosa-5(22),6,8-trien-3-yl]amino}-3-methyl-1-oxobutan-2-yl]carbamate (compound 3)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x UMM: tert-butyl [(2S)-1-{[(3S,17S)-2,16-dioxo-10,15-dioxa-1,21-diazatricyclo[15.3.1.1~5,9~]docosa-5(22),6,8-trien-3-yl]amino}-3-methyl-1-oxobutan-2-yl]carbamate(Non-covalent)

UMM.1: 12 residues within 4Å: Chain A: R.57, I.59, F.62, M.63, Q.65, G.74, A.103, N.104, A.105, Q.113, F.115, H.128 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.103, A:Q.113, A:F.115 Hydrogen bonds: A:Q.65, A:N.104, A:N.104 Water bridges: A:R.57, A:G.74 Salt bridges: A:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paulsen, J.L. et al., Evaluation of Free Energy Calculations for the Prioritization of Macrocycle Synthesis. J.Chem.Inf.Model. (2020)

Release Date

2020-06-24

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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