SMTL ID : 6x4q.1

Human cyclophilin A bound to a series of acylcic and macrocyclic inhibitors: (2R,5S,11S,14S,18E)-14-cyclobutyl-2,11,17,17-tetramethyl-15-oxa-3,9,12,26,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(25),18,20(28),21,23,26-hexaene-4,10,13,16-tetrone (compound 33)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x UOJ: (2R,5S,11S,14S,18E)-14-cyclobutyl-2,11,17,17-tetramethyl-15-oxa-3,9,12,26,29-pentaazatetracyclo[18.5.3.1~5,9~.0~23,27~]nonacosa-1(25),18,20(28),21,23,26-hexaene-4,10,13,16-tetrone(Non-covalent)

UOJ.1: 12 residues within 4Å: Chain A: R.57, F.62, M.63, Q.65, G.74, A.103, N.104, A.105, Q.113, F.115, L.124, H.128 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.62, A:A.103, A:F.115, A:L.124 Hydrogen bonds: A:R.57, A:Q.65, A:Q.65, A:N.104, A:N.104 Water bridges: A:R.57 pi-Cation interactions: A:R.57, A:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paulsen, J.L. et al., Evaluation of Free Energy Calculations for the Prioritization of Macrocycle Synthesis. J.Chem.Inf.Model. (2020)

Release Date

2020-06-24

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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