SMTL ID : 6x6r.2 (1 other biounit)

Crystal structure of C.difficile ribosyltransferase CDTa in complex with pCl-phenylthioDADMeImmA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x AR6: [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE(Covalent)

AR6.1: 2 residues within 4Å: Chain A: R.40, E.44 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.44 Water bridges: A:E.44 Salt bridges: A:R.40

1 x 4CT: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(4-chlorophenyl)sulfanyl]methyl}pyrrolidin-3-ol(Non-covalent)

4CT.2: 12 residues within 4Å: Chain A: Y.301, R.302, R.303, S.345, T.346, S.347, M.353, F.356, R.359, G.384, E.385, E.387 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:E.385 Hydrogen bonds: A:R.303, A:R.303, A:G.384, A:E.385 Salt bridges: A:E.387 pi-Stacking: A:F.356

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozharski, E., Crystal structure of C.difficile ribosyltransferase CDTa in complex with pCl-phenylthioDADMeImmA. To Be Published

Release Date

2021-10-13

Peptides

ADP-ribosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ADP-ribosyltransferase

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