SMTL ID : 6x6x.1 (1 other biounit)

Crystal structure of enzymatic binary toxin component from Clostridium difficile in complex with

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: H.392 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.392, H2O.8 ZN.2: 2 residues within 4Å: Chain A: E.120, H.206 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.120, A:E.120, A:H.206

1 x UTG: N-(2-chlorophenyl)-N'-[(furan-2-yl)methyl]thiourea(Non-covalent)

UTG.3: 13 residues within 4Å: Chain A: Y.99, Y.100, F.101, D.145, I.146, S.147, Y.149, P.151, D.155, E.156, P.158, L.162, S.183 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.145, A:Y.149, A:P.151, A:D.155 Hydrogen bonds: A:S.147, A:E.156

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 6 residues within 4Å: Chain A: R.302, R.303, S.345, T.346, M.353, F.356 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.303

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozharski, E., Crystal structure of enzymatic binary toxin component from Clostridium difficile in complex with. To Be Published

Release Date

2021-07-28

Peptides

ADP-ribosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosyltransferase

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