SMTL ID : 6xl4.4 (3 other biounits)

EGFR(T790M/V948R) in complex with AZD9291 and DDC4002

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: N.148, D.161 Ligands: ANP.2 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.161, H2O.2

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 21 residues within 4Å: Chain A: L.24, G.25, S.26, G.27, A.28, F.29, G.30, V.32, A.49, K.51, M.96, Q.97, L.98, M.99, C.103, D.143, R.147, N.148, L.150, D.161 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:L.24, A:A.28, A:F.29, A:Q.97, A:M.99, A:C.103, A:D.143, A:D.143, A:R.147, A:N.148 Water bridges: A:G.27, A:K.51, A:K.51, A:K.51, A:D.106 Salt bridges: A:K.51

1 x NQ1: 10-benzyl-8-fluoro-5,10-dihydro-11H-dibenzo[b,e][1,4]diazepin-11-one(Non-covalent)

NQ1.3: 15 residues within 4Å: Chain A: A.49, I.50, K.51, M.72, C.81, R.82, L.83, L.94, I.95, M.96, T.160, D.161, F.162, L.164, L.167 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.49, A:K.51, A:L.83, A:L.94, A:L.94, A:M.96, A:F.162, A:L.164, A:L.164, A:L.167 Hydrogen bonds: A:D.161, A:F.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beyett, T.S. et al., Molecular basis for cooperative binding and synergy of ATP-site and allosteric EGFR inhibitors. Nat Commun (2022)

Release Date

2021-06-30

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Epidermal growth factor receptor

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