SMTL ID : 6y7i.1 (1 other biounit)

Structure of the BRD9 bromodomain and compound 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x OF8: 1-(8-pyridin-2-ylpyrrolo[1,2-a]pyrimidin-6-yl)ethanone(Non-covalent)

OF8.1: 7 residues within 4Å: Chain A: F.31, F.32, V.36, I.40, A.41, N.87, Y.93 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.32, A:V.36, A:I.40, A:A.41 Hydrogen bonds: A:N.87 pi-Stacking: A:Y.93, A:Y.93

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: R.118, S.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.118, A:R.118, A:S.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diaz-Saez, L. et al., Structure of the BRD9 bromodomain and compound 2. To Be Published

Release Date

2021-03-31

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 9

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