SMTL ID : 6yjp.2 (2 other biounits)

Crystal structure of a complex between glycosylated NKp30 and its deglycosylated tumour ligand B7-H6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: W.5, N.27, S.29, L.100 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.100 Hydrogen bonds: A:N.27 NAG.2: 4 residues within 4Å: Chain B: S.145, I.179, N.181, N.187 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.145, B:N.181, B:N.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skorepa, O. et al., Natural Killer Cell Activation Receptor NKp30 Oligomerization Depends on Its N -Glycosylation. Cancers (Basel) (2020)

Release Date

2020-07-29

Peptides

Natural cytotoxicity triggering receptor 3: A
Natural cytotoxicity triggering receptor 3 ligand 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Natural cytotoxicity triggering receptor 3

Natural cytotoxicity triggering receptor 3 ligand 1

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