SMTL ID : 6ypx.2 (1 other biounit)

Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 2.11 A in C2221 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

homo-dimer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: D.80, A.82, H.88, S.144, H.151 Chain B: W.160 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.82, A:S.144, A:S.144 Water bridges: A:N.136, A:N.136

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: T.54, I.55 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.55 NA.4: 3 residues within 4Å: Chain B: D.72, Q.73, Q.74 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.73, B:Q.74, B:Q.74 Water bridges: B:D.72

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.3: 4 residues within 4Å: Chain B: D.80, L.90, S.144, H.151 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolot, R. et al., Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A. Biochim Biophys Acta Gen Subj (2021)

Release Date

2020-04-29

Peptides

Histidine triad nucleotide-binding protein 2, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
CCC

B
DDD

Histidine triad nucleotide-binding protein 2, mitochondrial

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