SMTL ID : 6yvp.2 (1 other biounit)

Human histidine triad nucleotide-binding protein 2 (hHINT2) complexed with dGMP and refined to 2.77 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.77 Å

Oligo State

homo-dimer

Ligands

2 x DGP: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE(Covalent)

DGP.1: 16 residues within 4Å: Chain A: I.55, F.56, I.59, L.64, F.78, R.79, D.80, V.81, L.90, N.136, A.142, Q.143, S.144, V.145, H.149, H.151 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:R.79, A:V.81, A:N.136, A:S.144, A:V.145, A:H.151 Water bridges: A:P.65, A:N.136, A:S.144 Salt bridges: A:H.149, A:H.151 DGP.2: 16 residues within 4Å: Chain B: I.55, F.56, I.59, L.64, F.78, R.79, D.80, V.81, L.90, N.136, A.142, Q.143, S.144, V.145, H.149, H.151 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:R.79, B:V.81, B:N.136, B:S.144, B:V.145, B:H.151 Water bridges: B:P.65, B:N.136, B:S.144 Salt bridges: B:H.149, B:H.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolot, R. et al., Biochemical, crystallographic and biophysical characterization of histidine triad nucleotide-binding protein 2 with different ligands including a non-hydrolyzable analog of Ap4A. Biochim Biophys Acta Gen Subj (2021)

Release Date

2020-05-13

Peptides

Histidine triad nucleotide-binding protein 2, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
BBB

B
BBB

Histidine triad nucleotide-binding protein 2, mitochondrial

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