SMTL ID : 6yri.1

THE CRYSTAL STRUCTURE OF THE COMPLEX OF HCAII WITH CAFFEIC ACID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.96, H.98, E.108, H.121, T.200 Ligands: DHC.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.96, A:H.98, A:H.121, H2O.1

1 x DHC: CAFFEIC ACID(Non-covalent)

DHC.2: 10 residues within 4Å: Chain A: Q.94, H.96, V.123, F.132, L.199, T.200, T.201, P.203 Ligands: ZN.1, GOL.3 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.123, A:F.132 Hydrogen bonds: A:T.200, A:T.201, A:T.201

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: N.64, H.66, A.67, N.69, Q.94, H.96, T.201 Ligands: DHC.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.64, A:N.69, A:N.69, A:Q.94 Water bridges: A:T.201, A:T.201 GOL.4: 5 residues within 4Å: Chain A: Y.9, P.15, D.244, W.246, P.248 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

D'Ambrosio, K. et al., Catechols: a new class of carbonic anhydrase inhibitors. Chem.Commun.(Camb.) (2020)

Release Date

2021-03-31

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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