SMTL ID : 6z0x.2 (2 other biounits)

HtrA1 inactive protease domain S328A with CARASIL mutations D174R R274Q

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-trimer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: T.155, G.156 Chain B: F.139, T.155 Chain C: T.155 Ligands: SO4.4, SO4.7 No protein-ligand interaction detected (PLIP) SO4.2: 2 residues within 4Å: Chain A: F.147, S.148 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:R.163, A:S.148 SO4.3: 3 residues within 4Å: Chain A: G.129, R.130, E.199 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.130 Salt bridges: A:R.130 SO4.4: 7 residues within 4Å: Chain A: T.155 Chain B: T.155, G.156 Chain C: F.139, T.155 Ligands: SO4.1, SO4.7 No protein-ligand interaction detected (PLIP) SO4.5: 2 residues within 4Å: Chain B: F.147, S.148 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.163, B:S.148 SO4.6: 3 residues within 4Å: Chain B: G.129, R.130, E.199 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.130 Salt bridges: B:R.130 SO4.7: 7 residues within 4Å: Chain A: F.139, T.155 Chain B: T.155 Chain C: T.155, G.156 Ligands: SO4.1, SO4.4 No protein-ligand interaction detected (PLIP) SO4.8: 2 residues within 4Å: Chain C: F.147, S.148 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:R.163, C:S.148 SO4.9: 3 residues within 4Å: Chain C: G.129, R.130, E.199 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:R.130 Salt bridges: C:R.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ingendahl, L. et al., Repair strategies addressing pathogenic protein conformations. To Be Published

Release Date

2021-05-19

Peptides

Serine protease HTRA1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Serine protease HTRA1

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