SMTL ID : 6z0y.2 (2 other biounits)

HtrA1 inactive protease domain S328A with CARASIL mutations D174R R274Q

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-trimer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: F.147, S.148 Chain C: R.163 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:S.148, C:R.163, C:R.163 SO4.2: 6 residues within 4Å: Chain A: N.79, H.81, D.111, T.205, L.206, K.207 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.111, A:L.206, A:K.207 Salt bridges: A:H.81 SO4.3: 4 residues within 4Å: Chain A: R.130, E.199 Chain B: N.24, R.27 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:N.24, A:R.130 Salt bridges: B:R.27, A:R.130 SO4.4: 3 residues within 4Å: Chain A: R.163 Chain B: F.147, S.148 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.148, A:R.163, A:R.163 SO4.5: 6 residues within 4Å: Chain B: N.79, H.81, D.111, T.205, L.206, K.207 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.111, B:L.206, B:K.207 Salt bridges: B:H.81 SO4.6: 4 residues within 4Å: Chain B: R.130, E.199 Chain C: N.24, R.27 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:N.24, B:R.130 Salt bridges: C:R.27, B:R.130 SO4.7: 3 residues within 4Å: Chain B: R.163 Chain C: F.147, S.148 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:R.163, B:R.163, C:S.148 SO4.8: 6 residues within 4Å: Chain C: N.79, H.81, D.111, T.205, L.206, K.207 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:D.111, C:L.206, C:K.207 Salt bridges: C:H.81 SO4.9: 4 residues within 4Å: Chain A: N.24, R.27 Chain C: R.130, E.199 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:N.24, C:R.130 Salt bridges: A:R.27, C:R.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ingendahl, L. et al., Repair strategies addressing pathogenic protein conformations. To Be Published

Release Date

2021-05-19

Peptides

Serine protease HTRA1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Serine protease HTRA1

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