SMTL ID : 6zbp.1

H11-H4 complex with SARS-CoV-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: F.9, G.10, F.13, N.14, V.38, L.39 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.9, A:L.39

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain B: W.53, S.54, G.55, R.72, K.74 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:W.53, B:G.55 Water bridges: B:K.74 Salt bridges: B:R.72, B:K.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Naismith, J.H., H11-D4 complex with SARS-CoV-2 RBD. To Be Published

Release Date

2020-07-29

Peptides

Spike glycoprotein: A
H11-H4: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
EEE

B
FFF

Spike glycoprotein

H11-H4

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