SMTL ID : 6zmr.1

Porcine ATP synthase Fo domain

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-8-1-1-1-1-1-1-1-1-mer

Ligands

1 x CDL: CARDIOLIPIN(Non-covalent)

CDL.1: 32 residues within 4Å: Chain J: L.30, F.31, R.41, T.42, I.45, Q.46, L.49, I.84, L.85, L.88, F.204, L.208 Chain K: L.14, G.15, L.16, I.61, I.64, L.67, V.68, V.71, K.72, G.75, A.76, I.78, G.79 Chain N: K.53, G.54, S.55, V.56, L.59, S.60, L.63 19 PLIP interactions: 7 interactions with chain J, 8 interactions with chain K, 4 interactions with chain N Hydrophobic interactions: J:F.31, J:R.41, J:T.42, J:Q.46, J:L.49, K:L.14, K:L.16, K:I.61, K:I.64, K:L.67, K:L.67, N:V.56, N:L.63 Salt bridges: J:R.41, J:R.41, K:K.72, K:K.72, N:K.53 Hydrogen bonds: N:S.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Spikes, T.E. et al., Structure of the dimeric ATP synthase from bovine mitochondria. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-09-09

Peptides

ATP synthase protein 8: A
ATP synthase F(0) complex subunit C1, mitochondrial: BCDEFGHI
ATP synthase subunit a: J
ATP synthase peripheral stalk-membrane subunit b: K
ATP synthase subunit d, mitochondrial: L
ATP synthase subunit e, mitochondrial: M
ATP synthase subunit f, mitochondrial: N
ATP synthase g subunit: O
ATP synthase j subunit (6.8PL): P
ATP synthase membrane subunit DAPIT: Q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
8

B
K

C
L

D
M

E
N

F
O

G
P

H
Q

I
R

J
a

K
b

L
d

M
e

N
f

O
g

P
j

Q
k

Membrane

We predict this structure to be a membrane protein.
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ATP synthase protein 8

ATP synthase F(0) complex subunit C1, mitochondrial

ATP synthase subunit a

ATP synthase peripheral stalk-membrane subunit b

ATP synthase subunit d, mitochondrial

ATP synthase subunit e, mitochondrial

ATP synthase subunit f, mitochondrial

ATP synthase g subunit

ATP synthase j subunit (6.8PL)

ATP synthase membrane subunit DAPIT

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