- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.33 Å
- Oligo State
- monomer
- Ligands
- 1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 13 residues within 4Å:- Chain A: M.21, E.23, I.25, G.230, N.231, W.261, N.350, E.351, H.400, Y.402, E.429, W.491
- Ligands: GOL.14
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.231, A:N.231, A:N.350, A:E.351
- Water bridges: A:N.231
GOL.14: 9 residues within 4Å:- Chain A: N.231, E.351, F.353, F.354, H.400, Y.402, F.441, W.491
- Ligands: GOL.5
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.231, A:N.231, A:E.351
- Water bridges: A:N.350
GOL.15: 4 residues within 4Å:- Chain A: Y.293, L.295, G.297, F.354
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:L.295, A:L.295
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.6: 4 residues within 4Å:- Chain A: P.14, S.15, T.16, R.344
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:S.15, A:S.15, A:S.15, A:T.16
- Water bridges: A:T.16, A:R.344
- Salt bridges: A:R.344
SO4.7: 4 residues within 4Å:- Chain A: V.572, S.573, S.574, T.575
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:V.572, A:S.574, A:T.575
SO4.10: 2 residues within 4Å:- Chain A: V.1, T.2
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.2
- Water bridges: A:V.1
SO4.11: 1 residues within 4Å:- Chain A: N.8
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.8, A:N.8
SO4.12: 3 residues within 4Å:- Chain A: P.59, I.60, S.61
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.61
SO4.13: 4 residues within 4Å:- Chain A: N.49, T.50, A.51, A.52
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.51
- Water bridges: A:A.52
SO4.16: 3 residues within 4Å:- Chain A: S.326, A.327, P.328
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.327
- Water bridges: A:D.314
SO4.18: 3 residues within 4Å:- Chain A: Q.419
- Ligands: NAG-NAG-BMA-MAN.1, NAG-NAG-BMA-MAN.1
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.419
SO4.20: 4 residues within 4Å:- Chain A: R.378, Q.395, G.422, T.424
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.378
- Salt bridges: A:R.378
SO4.21: 2 residues within 4Å:- Chain A: I.604, G.605
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.605
- Water bridges: A:G.605
SO4.22: 2 residues within 4Å:- Chain A: T.147, Q.148
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.148
- Water bridges: A:Q.148
SO4.23: 3 residues within 4Å:- Chain A: T.136, A.138, R.140
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:T.136, A:T.136
- Water bridges: A:N.137, A:A.138, A:R.140, A:R.140
- Salt bridges: A:R.140
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.8: 3 residues within 4Å:- Chain A: W.57, H.58, P.59
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.58
ACT.9: 5 residues within 4Å:- Chain A: T.530, G.533, T.534, L.535, Q.560
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.534, A:L.535, A:Q.560
- Water bridges: A:T.530
ACT.19: 6 residues within 4Å:- Chain A: D.212, E.215, T.216, E.219, V.503, K.505
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:D.212
- Hydrogen bonds: A:E.215, A:T.216
- Salt bridges: A:K.505
ACT.24: 2 residues within 4Å:- Chain A: T.4, T.527
2 PLIP interactions:2 interactions with chain A- Water bridges: A:T.4, A:T.527
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McGregor, N.G.S. et al., Structure of a GH51 alpha-L-arabinofuranosidase from Meripilus giganteus: conserved substrate recognition from bacteria to fungi. Acta Crystallogr D Struct Biol (2020)
- Release Date
- 2020-11-11
- Peptides
- MgGH51: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAA
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.33 Å
- Oligo State
- monomer
- Ligands
- 1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McGregor, N.G.S. et al., Structure of a GH51 alpha-L-arabinofuranosidase from Meripilus giganteus: conserved substrate recognition from bacteria to fungi. Acta Crystallogr D Struct Biol (2020)
- Release Date
- 2020-11-11
- Peptides
- MgGH51: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAA