SMTL ID : 6zsn.1

Crystal structure of rsGCaMP double mutant Ile80His/Val116Ile in the OFF state (illuminated)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

6 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 2 residues within 4Å: Chain A: Y.60, E.216 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.218 Water bridges: A:Q.61 FMT.2: 8 residues within 4Å: Chain A: P.65, I.66, G.67, D.68, G.69, A.208, E.211, G.212 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.66, A:G.67, A:G.69, A:G.212, A:G.212 FMT.3: 3 residues within 4Å: Chain A: L.99, F.101, D.268 No protein-ligand interaction detected (PLIP) FMT.4: 4 residues within 4Å: Chain A: V.16, G.20, Q.307, E.353 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.307, A:E.353 FMT.5: 3 residues within 4Å: Chain A: D.33, K.34, Q.35 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.34, A:Q.35 FMT.6: 5 residues within 4Å: Chain A: V.54, Q.55, L.56, K.222, D.223 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.56, A:D.223 Water bridges: A:K.222

4 x CA: CALCIUM ION(Non-covalent)

CA.7: 5 residues within 4Å: Chain A: D.395, D.397, D.399, Q.401, E.406 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.395, A:D.397, A:D.399, A:Q.401, A:E.406 CA.8: 5 residues within 4Å: Chain A: D.286, D.288, D.290, T.292, E.297 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.286, A:D.288, A:D.290, A:T.292, A:E.297 CA.9: 6 residues within 4Å: Chain A: D.322, D.324, D.326, T.328, D.330, E.333 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.322, A:D.324, A:D.326, A:D.330, A:E.333 CA.10: 5 residues within 4Å: Chain A: D.359, D.361, N.363, Y.365, E.370 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.359, A:D.361, A:D.361, A:Y.365, A:E.370

1 x NA: SODIUM ION(Non-functional Binders)

NA.11: 1 residues within 4Å: Chain A: L.246 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mishra, K. et al., Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging. Nat.Biotechnol. (2022)

Release Date

2021-10-27

Peptides

Green fluorescent protein,Green fluorescent protein,Calmodulin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Green fluorescent protein,Green fluorescent protein,Calmodulin

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